PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101734.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 204aa    MW: 24100.4 Da    PI: 9.8577
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57351.43.1e-161811597
          DUF573 15 lLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97
                    +L+Gl  f a+      + +++fy+f+k++++ +++++q++e irrLK Kf+++ kk +++g+  +f  +h++ +f++sk +Wg
  XP_011101734.1  1 MLKGLAVFWADGR---NNKWTEFYNFIKDNLQHQFTRTQVSEEIRRLKGKFENNFKKtRANGDWLDFLDAHESAVFDVSKTLWG 81
                    5777777755544...4689**********************************9997889999*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.3E-14181IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MLKGLAVFWA DGRNNKWTEF YNFIKDNLQH QFTRTQVSEE IRRLKGKFEN NFKKTRANGD  60
WLDFLDAHES AVFDVSKTLW GEDKCEAGDK HAEKEKETPQ KGDRSRFQKK RKRAGKEHDA  120
DKEIMKNQKK TGKIDKEEFA SAYPLVALSL NENGYPNFIK EKFLLIGREK LQELEEKWRD  180
VKAAELSLEL KRIDLIRRDL HNLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075715.11e-146PREDICTED: mediator-associated protein 1-like
RefseqXP_011075718.11e-146PREDICTED: mediator-associated protein 1-like
RefseqXP_011101734.11e-147PREDICTED: uncharacterized protein LOC105179798
RefseqXP_011102040.11e-146PREDICTED: mediator-associated protein 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13664413
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-08DNA-binding storekeeper protein-related transcriptional regulator